PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c6_14880V3.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family ERF
Protein Properties Length: 712aa    MW: 77503.4 Da    PI: 5.3256
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c6_14880V3.1.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.3e-1681131256
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        ++ GVr+++ +grWvAeI+d +   ++ r +lg+f++aee aka++ a+++l+g+
  Pp3c6_14880V3.1.p  81 RFVGVRQRP-SGRWVAEIKDTT---QKIRLWLGTFDSAEEGAKAYDSAARALRGA 131
                        789******.7*********32...35*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.24E-2880137No hitNo description
PROSITE profilePS5103219.04581138IPR001471AP2/ERF domain
PfamPF008471.6E-1081130IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-2581137IPR001471AP2/ERF domain
SMARTSM003801.4E-2981144IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-1781138IPR016177DNA-binding domain
PRINTSPR003679.7E-68293IPR001471AP2/ERF domain
PRINTSPR003679.7E-6104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    Send to blast
MSSGSNASRK PSVTSTLFKA SSRFLHGSTG NGQAAGGKSM KRQRAGASID KEVLSAESNN  60
TPDTALDDHK DTSGGAKSKK RFVGVRQRPS GRWVAEIKDT TQKIRLWLGT FDSAEEGAKA  120
YDSAARALRG ANTRTNFVPG MACESTVPAS KATRLIRLRQ IAAASKASEK EARNVTQSPE  180
PKDHLRRSQD DSKDQVISPL VRQDFQHSSN PRTAVDDTPP HLPSSPPKPA RLIGRRHNAP  240
LTSAKADQED VAPNPTDNDR SAVDRGPKLE VGSFPSPDRS PPKLEPQQSI ISENPSNAKN  300
QRLIASLQDS SPTLLRLSLP SCSIPQDCIQ PQNLADGEAQ LVSSGLSEVA VTNVKFSKQT  360
HYSTQRAEEW HGSSPFESFS TLPVDNFVPQ SPNPFLIVPL EASRQQFRTD HNMSGLVGCS  420
HHDASSQQQL SCSTNRDHVS IYQSERYGDL DPGMSNNNAI LDRQRSLRSI AQHLNSDDAM  480
TLDAAKCMME PKCCEPLASS VPKGQMDYTN TEMYGTESEK RSPEICDLRE KGFSNLHGPD  540
IPWQDYIWGD TTGMESGLLG LDLSCESSGV YNSTFDFTET IERDSCTSVV EEHLSDNSDF  600
MLRVQFDSSP CTSDSFQECV LLTQPDYCMS PHESSLRGLP LSPPDTHLSN SSPSLWRVND  660
TSTWDGQSSG STETTTTTDL KTDGDGAGEC TSQDHEALWS SMDLPPLCMV A*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGPP1S195_38V6.10.0(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-28related to AP2 11